PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009764333.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 267aa    MW: 28205.6 Da    PI: 4.5705
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009764333.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.26.4e-16102149355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++G+r  +++g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+++l+g
  XP_009764333.1 102 FRGIR--SRSGKWVSEIREPRK---TTRIWLGTYPTPEMAAAAYDVAALALKG 149
                     89995..678*********843...5***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.0E-27101165IPR001471AP2/ERF domain
PROSITE profilePS5103219.902101157IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.9E-25101157IPR001471AP2/ERF domain
CDDcd000181.23E-15102157No hitNo description
PfamPF008473.1E-9102149IPR001471AP2/ERF domain
SuperFamilySSF541713.53E-17102158IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MADHPADDST KTSQKNQPPQ PSESSQTPFC PIPPPLLPPL PVEETNISPR PLISDIAILE  60
NTKSPPKTVQ LPNIIPTVTT TMSSTSSGGS PSRPTGGKHA VFRGIRSRSG KWVSEIREPR  120
KTTRIWLGTY PTPEMAAAAY DVAALALKGG DAVINFPGNL TSYPSLPPSP SPADIRKAAA  180
SAAALMKPQT GEGTMPTQPG NDDQSSGSAQ MISTDGGNEY IDEEALFDMP NLLVDMAEAM  240
MVSPPRMNSP PPSDSPGNSD AESLWSY
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00558DAPTransfer from AT5G52020Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009764333.10.0PREDICTED: ethylene-responsive transcription factor ERF027-like
SwissprotQ9FJ903e-52ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLM1C2X71e-91M1C2X7_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000585873e-91(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.13e-41ERF family protein